LOCUS BC097160 1296 bp mRNA linear VRT 17-JUL-2006 DEFINITION Danio rerio si:ch211-234p6.13, mRNA (cDNA clone MGC:114100 IMAGE:7448393), complete cds. ACCESSION BC097160 VERSION BC097160.1 GI:66911931 KEYWORDS MGC. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio. REFERENCE 1 (bases 1 to 1296) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1296) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-JUN-2005) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Will Talbot cDNA Library Preparation: Dr. Yutaka Suzuki and Dr. Sumio Sugano cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 226 Row: n Column: 24 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 53734152. FEATURES Location/Qualifiers source 1..1296 /organism="Danio rerio" /mol_type="mRNA" /db_xref="taxon:7955 " /clone="MGC:114100 IMAGE:7448393" /tissue_type="Embryo, whole, 2-8 hr, mixed wild type, pool of 2500 embryos" /clone_lib="NIH_ZGC_15" /lab_host="DH10B" /note="Vector: pME18S-FL3" gene 1..1296 /gene="si:ch211-234p6.13" /gene_synonym="fi20c07" /gene_synonym="wu:fi20c07" /db_xref="GeneID:327615 " /db_xref="ZFIN:ZDB-GENE-030131-5826 " CDS 98..766 /gene="si:ch211-234p6.13" /gene_synonym="fi20c07" /gene_synonym="wu:fi20c07" /codon_start=1 /product="si:ch211-234p6.13" /protein_id="AAH97160.1 " /db_xref="GI:66911932" /db_xref="GeneID:327615 " /db_xref="ZFIN:ZDB-GENE-030131-5826 " /translation="MLLFFCLLSVTLAAAEVGLSGKTLLFPTATDTSYVKLSPRKPLS LSAFTLCMRVATELPAKREIILFAYRTPDDDELNVWREKDGRFSVYIQSSKDAAFFRL HPLSTFQTHLCVTWESATGLTAFWVDGQRSLHQVYRKGYSIRPGGTVLLGQDPDSYVG SFNAAQSFVGEITDLQMWDYVLSGTQIKAVYYNQDNRVKGNVFDWNTIKYDVTGNVLV VPDN" ORIGIN 1 attacgctgc atccgagcac acacacctgc tttaaagctt acgcaaatca gctgataaac 61 accttcagtg aaactgtgca gtcagacctg gagcaagatg ctgcttttct tctgtctgct 121 ctctgtgaca ttagcggctg ctgaagtggg tctcagtggt aaaactcttc tgttcccgac 181 tgctactgac accagttatg ttaaactgag tcctagaaaa cccctgagtc tgtcagcgtt 241 tactctctgc atgcgtgtgg cgacggagct gccggccaaa agggagatca tcctgttcgc 301 ctaccgcaca cctgacgatg atgagctcaa tgtgtggaga gagaaagatg gccgtttctc 361 cgtctatatt cagtctagta aagatgcagc gtttttccgt cttcatcctc tctccacatt 421 tcagactcac ctgtgcgtca cctgggagtc tgcgactggt cttactgcct tctgggtgga 481 cggtcaacgc agtttgcacc aagtgtacag gaaaggttac tccattcgtc ctggcggcac 541 cgtcctgctc ggacaagacc cggattcata tgtaggttcc tttaatgcag ctcagagctt 601 tgtgggagaa attacggatc tgcaaatgtg ggactatgtg ctgtccggca ctcagattaa 661 agcggtgtac tataaccagg ataatcgtgt gaagggaaat gtgtttgact ggaacaccat 721 caaatatgat gttactggaa atgtgcttgt ggttccagat aactgactgg atcagctgta 781 atgtgcacga ttaaccaaac aataaaacaa ttctgaaaac tgcagcttca gttcgtttac 841 catagacaaa ttcttaaatg ttaatggggt tcagttaaac atgacctcct caatctaact 901 cgtttttaaa atgttatgtt agccaagcaa tggggttcac agacctccaa aggcaagtga 961 aatctacttg aaacaagcta ctgaggatag aggtaaagtt ggttttatat taacacattt 1021 gttcagtgac gactccttgt attgtttccc actgcacttt aaatatttga tctagattaa 1081 catgcaagtg tgatttttga aatcaacttt taacacttta tattactgtg aacaatgttg 1141 tacattgacg gtcattggct gctaaaatga ttctgctatt tagagcttgc aaacaatact 1201 tttgtgaaat ttatattatt aaggggaaag tctgaatgtc tgactaaaat cggcttaacc 1261 tctatggcta caggcccaaa aaaaaaaaaa aaaaaa //