LOCUS BC154042 803 bp mRNA linear VRT 16-OCT-2008 DEFINITION Danio rerio si:ch211-234p6.12, mRNA (cDNA clone MGC:171909 IMAGE:7411362), complete cds. ACCESSION BC154042 VERSION BC154042.1 GI:158254225 KEYWORDS MGC. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio. REFERENCE 1 (bases 1 to 803) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 803) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (06-OCT-2007) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Takuya Sakaguchi and Didier Stainier cDNA Library Preparation: Dr. Sumio Sugano cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 311 Row: p Column: 22 This clone was selected for full length sequencing because it passed the following selection criteria: Similarity but not identity to protein. FEATURES Location/Qualifiers source 1..803 /organism="Danio rerio" /mol_type="mRNA" /db_xref="taxon:7955 " /clone="MGC:171909 IMAGE:7411362" /tissue_type="Liver, AB, adult zebrafish" /clone_lib="NIH_ZGC_8" /lab_host="DH10B" /note="Vector: pME18S-FL3" gene 1..803 /gene="si:ch211-234p6.12" /db_xref="GeneID:100141350 " /db_xref="ZFIN:ZDB-GENE-060503-220 " CDS 32..703 /gene="si:ch211-234p6.12" /codon_start=1 /product="si:ch211-234p6.12 protein" /protein_id="AAI54043.1 " /db_xref="GI:158254226" /db_xref="GeneID:100141350 " /db_xref="ZFIN:ZDB-GENE-060503-220 " /translation="MLVLFFCLLSLTLAATEVGLGGKTLFFPTNTDSSYVQIDPEKPL SLSAFTLCMRVRLELLVDREVILFAYRTSEVDELNVWREKDGRVGLVIQSDKDAAMVH LSPRSTFQTHLCITWDSATGLTGFWEDGRRSVYQMYRKGYSIRPGGTVLLGQDPDSFV GSFDAAQSFVGEITDVQMWDYVLPSTQIKAVYSNQDDRVKGNVFDWNTIKYDVTGNVL VVPDN" ORIGIN 1 aaaaaacctg ctgaatcgga cttggagcaa gatgttggtt ttgtttttct gtctgctctc 61 gctgacatta gcggctaccg aagtgggtct cggtggtaaa actctttttt tcccgaccaa 121 tactgactcc agttatgttc aaatcgatcc tgaaaaaccc ctgagtctgt cagcgtttac 181 tctctgcatg cgtgtcaggt tggagctgct ggtcgatagg gaggtcatct tgttcgccta 241 ccgcacatct gaagttgatg aactcaacgt gtggagagag aaagatggcc gcgtgggttt 301 ggttattcag tctgataagg atgcagcaat ggttcacctg tctccacgct ccacatttca 361 gactcacctg tgcatcacct gggattctgc aactggtctt actggttttt gggaggacgg 421 acgtcgcagt gtgtaccaaa tgtacaggaa aggttactcc attcgtcctg gcggcaccgt 481 cctgctcgga caagacccgg attcatttgt aggttccttt gatgcagctc agagctttgt 541 gggagaaatt acagatgtgc aaatgtggga ctatgttctg cccagcactc agattaaagc 601 ggtgtactca aaccaggatg atcgtgtgaa gggaaatgtg tttgattgga acaccatcaa 661 atatgatgtt actggaaatg tgcttgtggt tccagataac tgactggatc agctgtaatg 721 ttcacccaag attaaccaaa caataaaaca attctgaaaa aaaaaaaaaa aaaaaaaaaa 781 aaaaaaaaaa aaaaaaaaaa aaa //