LOCUS BC162745 735 bp mRNA linear VRT 04-AUG-2008 DEFINITION Danio rerio si:ch211-234p6.8, mRNA (cDNA clone MGC:194233 IMAGE:9038033), complete cds. ACCESSION BC162745 VERSION BC162745.1 GI:190339557 KEYWORDS MGC. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio. REFERENCE 1 (bases 1 to 735) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 735) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-APR-2008) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Harvard cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRCY Plate: 2 Row: F Column: 15. FEATURES Location/Qualifiers source 1..735 /organism="Danio rerio" /mol_type="mRNA" /db_xref="taxon:7955 " /clone="MGC:194233 IMAGE:9038033" /tissue_type="Pooled, Harvard Zebrafish Pool, whole embryo 5 somites, whole embryo 20 hpf, whole embryo 24 hpf, whole embryo 48 hpf, whole adult fish" /clone_lib="NIH_ZGC_37" /lab_host="DH10B" /note="Vector: pCR4-TOPO forward; Clone identification sequence tag: TTGGCACG" gene 1..735 /gene="si:ch211-234p6.8" /db_xref="GeneID:797437 " /db_xref="ZFIN:ZDB-GENE-060503-881 " CDS 24..701 /gene="si:ch211-234p6.8" /codon_start=1 /product="si:ch211-234p6.8" /protein_id="AAI62745.1 " /db_xref="GI:190339558" /db_xref="GeneID:797437 " /db_xref="ZFIN:ZDB-GENE-060503-881 " /translation="MLGFIFTLLILTPAAAEVGLGGKVLLFQTQTATSYVKLTPDKPL SLSAFTLCMRVATELLGERSVILFAYRTSEVDELNVWRRKNGSVGLFIQTSSNPASFY LPPLSTFQTHLCVSWESATGLTAFWVDGRRSLYQIYKKDASVRPGGTVLLGQDPDSYV GSFDANQCFIGEITDVKLWDYVLSEIQIKALYSNQDPLVPAGNVFDWDTVKYDVVGNV TVANDNH" ORIGIN 1 ttctttcaga cctgcagcaa aagatgttgg gctttatttt cactctgctc attctgacac 61 cagcagctgc tgaagtgggt cttggtggaa aagttctttt gtttcaaacc caaactgcta 121 ccagttatgt taaactgact cctgataaac ccctgagtct gtcagcgttt actctctgca 181 tgcgtgtggc gaccgagctg ctgggcgagc gatcggtcat tctgttcgcc taccgcactt 241 ctgaagttga tgaactcaat gtgtggagac ggaaaaatgg cagtgtgggt ttgtttattc 301 agactagtag caatccagca agtttctatc ttccccctct ctccacattt cagacacatc 361 tgtgtgtgtc ctgggagtct gcaactggtc ttactgcttt ttgggtggac gggcgtcgca 421 gtttgtacca gatctataag aaagatgcct ctgtcagacc tggcggcacc gtactgctcg 481 gacaggaccc tgactcatat gtaggttcgt ttgacgcaaa tcagtgcttt attggtgaaa 541 ttacagatgt gaaactgtgg gattatgttc tgtctgagat ccagattaag gctttgtatt 601 caaaccagga tccgttggtg ccagcgggaa atgtgtttga ctgggacacc gtcaaatatg 661 atgttgttgg aaatgtgacg gtggctaatg ataatcactg atcttgatct gttgtagcgc 721 attgtgtgtt tcacg //