LOCUS BC150371 1097 bp mRNA linear VRT 30-AUG-2007 DEFINITION Danio rerio zgc:171660, mRNA (cDNA clone MGC:171660 IMAGE:7451906), complete cds. ACCESSION BC150371 VERSION BC150371.1 GI:152013091 KEYWORDS MGC. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio. REFERENCE 1 (bases 1 to 1097) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1097) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (13-JUL-2007) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Will Talbot cDNA Library Preparation: Dr. Yutaka Suzuki and Dr. Sumio Sugano cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 312 Row: e Column: 7 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis, Similarity but not identity to protein. FEATURES Location/Qualifiers source 1..1097 /organism="Danio rerio" /mol_type="mRNA" /db_xref="taxon:7955 " /clone="MGC:171660 IMAGE:7451906" /tissue_type="Embryo, whole, 2-8 hr, mixed wild type, pool of 2500 embryos" /clone_lib="NIH_ZGC_15" /lab_host="DH10B" /note="Vector: pME18S-FL3" gene 1..1097 /gene="zgc:171660" /db_xref="GeneID:100124600 " /db_xref="ZFIN:ZDB-GENE-070822-13 " CDS 252..929 /gene="zgc:171660" /codon_start=1 /product="zgc:171660 protein" /protein_id="AAI50372.1 " /db_xref="GI:152013092" /db_xref="GeneID:100124600 " /db_xref="ZFIN:ZDB-GENE-070822-13 " /translation="MLGFLFTLLNLTPAATEVGLGGKVLLFPTQTATSYVKLTPDKPL SLSAFTLCMRVATELQGGREVILFAYRTSEVDELNVWREKDGRLFMYIQSSSDGARFY LPPLSTFQTHLCVSWESATGLTALWVDGRRSLYQIYKKDASVRPGGTVLLGQDPDSYV GSFDANQCFIGEITDVKLWDYVLSEIQIKALYSNQDPLVPAGNVFDWNTVKYDVVGNV TVANDNL" ORIGIN 1 actatcgtat gtttaggctc acacatggtg tctgaagatt tgaccagcgc gcaaacatac 61 tttatttagt tttggagcat gacatacata aacaagggct ctgttctgct aaacatattc 121 acagagaaag caggacattt cgttttggag caacaatatg aaaggagaca gtggcgctgc 181 tagaggcctg actgacccgg tcctgatcct ccatcctgca cacacatcag acatcagacc 241 tgcagcaaat gatgttgggc tttcttttca ctctgctcaa tctgacacca gcagctactg 301 aagtgggtct tggtggaaaa gttcttctgt ttccaaccca aactgctacc agctatgtta 361 aactgactcc tgataaaccc ttgagtctgt cagcgtttac tctctgcatg cgtgtggcga 421 cggagctcca gggcgggcgg gaagtcattc tgttcgccta tcgcacttct gaagttgatg 481 agctcaatgt gtggagagag aaagatggcc gattgttcat gtatatccag tctagtagcg 541 atggagcacg tttctatctt ccccctctct ccacatttca gacacatctg tgcgtgtcct 601 gggagtctgc aactggtctt actgctttgt gggtggacgg gcgtcgcagt ttgtaccaga 661 tctataagaa agatgcctct gtcagacctg gcggcaccgt actgctcgga caggaccctg 721 attcatatgt aggttcgttt gacgcaaatc agtgctttat tggtgaaatt acagatgtga 781 aactgtggga ttatgttctg tctgagatcc agattaaggc tttgtattca aaccaggatc 841 cgttggtgcc agcgggaaat gtgtttgact ggaacaccgt caaatatgat gttgtgggaa 901 atgtgacggt ggctaatgat aatctctgat cttgatctgt tgtagcgcat tgtgtgtttc 961 acgtggttgt gtctatcttt atagtctgtt tatctctttt aatgaaagct gtaaggccta 1021 tcaaataaat ctttctcagc atttcaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1081 aaaaaaaaaa aaaaaaa //